[FALSE] Puts the Icarus interpreter into debugging mode.
-off
[FALSE] Sets the off-line version of a databank.
-id <string>
[""] user ID, or file, name associated with a WWW session
-uName <string>
[""] The user name from the web server
-gName <string>
[""] The group name from the web server
-sort <string>
[""] name of field to sort the query on
-sortDir <string>
[""] ascending (0) or descending (1) sort
-qNew
[FALSE] Debugging flag - used to investigate the fastest way of doing a query
-qDes
[FALSE] Debugging flag - to investigate the fastest way of doing a query
-qCSort
[FALSE] Debugging flag - use sort combine method.
-qCOr
[FALSE] Debugging flag - use or combine method.
Sans option
Obtention d'un catalogue de séquences (q.dat)
syntaxe: getz '[nom_banque-champ:valeur]'
Le champ peut etre le libellé court (org) ou le libellé long (organisme)
et alltext (all) pour tous les champs indexés de la banque.
La liste des noms des banques est obtenue avec l'option -libs
La liste des champs d'une banque est obtenue avec l'option -info
syntaxe: getz @nom_liste
nom_liste est un fichier de nom de séquence de banque sous SRS.
Chaque nom de séquence est défini par: Banque_SRS:nom_de_séquence
Banque_SRS:numéro_d'accession
ex:fichier catalogue: Ma_Liste
GENBANK:AAU57044
GENBANK:AAU64612
GENBANK:ABU64613
ex: getz @Ma_Liste -f 'aut des'
-e: Affiche l'entrée en entier
syntaxe: getz '[nom_banque-champ:valeur]'-e
Le champ peut etre le libellé court (org) ou le libellé long (organisme)
ex: getz '[swissprot-id:acha_human]' -e
ex: getz '[swissprot-org:haemophilus gallinarum]' -e
ex: getz '[embl-des:insulin&receptor]' -e
-info: Affiche les informations d'une banque
Informations portant sur:
Champs detaillés (nom long et court,type d'index, nbre, date...)
getz -info swissprot
Library: "SWISSPROTRELEASE" , release "41", from group: "SequenceSub"
Data Fields (B=busy, C=compressed):
Name Short Type Inx Ids No No Creation B C
Name (kb) (kb) Words IDs Date
-----------------------------------------------------------------------
AllText all show
ID id id 2831 598 122564 122564 24/8/03 0 1
AccNumber acc index 2868 730 149414 149578 24/8/03 0 1
PrimAccNumber pac index 2369 598 122564 122564 24/8/03 0 1
Description des index 1350 3578 65374 732810 24/8/03 0 1
GeneName gen index 2225 959 115152 196454 24/8/03 0 1
Keywords key index 28 2269 873 464724 24/8/03 0 1
DateCreated crd date 1 598 41 122564 24/8/03 0 1
LastSequenceUpdate lsu date 1 598 41 122564 24/8/03 0 1
LastAnnotationUpdate lau date 1 598 40 122564 24/8/03 0 1
Organism org index 383 1043 12040 213673 24/8/03 0 1
Taxon tax index 138 5323 5467 1090159 24/8/03 0 1
NCBI_TaxId txi num 147 631 7695 129354 24/8/03 0 1
Organelle ogn index 13 64 596 13110 24/8/03 0 1
ProteinID prd index 4410 1032 208148 211475 24/8/03 0 1
Checksum cks index 3587 598 122444 122564 24/8/03 0 1
DbName dbn index 1 3287 48 673247 24/8/03 0 1
DBxref dr index 12064 13625 575703 2790519 24/8/03 0 1
SeqLength sl num 42 598 2369 122564 24/8/03 0 1
Sequence seq show
Authors aut index 3946 23972 164409 3506775 24/8/03 0 1
Title tit index 1663 18148 73670 2654920 24/8/03 0 1
Journal jnl index 41 1330 1301 194588 24/8/03 0 1
VolumeNo vol num 18 1330 1023 194588 24/8/03 0 1
FirstPage fp num 261 1330 14387 194588 24/8/03 0 1
Year yr num 1 1330 53 194588 24/8/03 0 1
MedlineID mid index 1775 1292 83254 189021 24/8/03 0 1
PubMedID pmd index 1709 1299 83602 190131 24/8/03 0 1
RefPosition rp index 153 7051 7865 1031584 24/8/03 0 1
RefCommentCode rcc index 0 972 5 142187 24/8/03 0 1
RefComment rc index 282 972 10642 142187 24/8/03 0 1
CommentType cct index 1 2771 22 405433 24/8/03 0 1
Comment cc index 1438 26250 62761 3840053 24/8/03 0 1
Family fam index 0 0 0 0 24/8/03 0 1
EventName evna index 0 0 0 0 24/8/03 0 1
EventType evty index 0 0 0 0 24/8/03 0 1
AltProdComment altprodcc index 0 0 0 0 24/8/03 0 1
IsoId isoid index 0 0 0 0 24/8/03 0 1
AltProdSynonym altprodsyn index 0 0 0 0 24/8/03 0 1
AltProdSeqId altprodseq index 0 0 0 0 24/8/03 0 1
FtKey ftk index 1 4483 34 655938 24/8/03 0 1
FtLength ftl num 31 4467 1735 653548 24/8/03 0 1
FtDescription ftd index 1512 10134 58765 1482590 24/8/03 0 1
CountedItem cti index 4 6145 128 898972 24/8/03 0 1
CountedN ctn num 2 6145 132 898972 24/8/03 0 1
Links:
index-link SWISSPROTRELEASE <-> SWISSPROTRELEASE_reference
index-link SWISSPROTRELEASE <-> SWISSPROTRELEASE_comment
index-link SWISSPROTRELEASE <-> SWISSPROTRELEASE_altproducts
index-link SWISSPROTRELEASE <-> SWISSPROTRELEASE_features
index-link SWISSPROTRELEASE <-> SWISSPROTRELEASE_counter
read-link SWISSPROTRELEASE <-> GENBANKRELEASE
read-link SWISSPROTRELEASE <-> GENBANKNEW
read-link SWISSPROTRELEASE <-> EMBLRELEASE
read-link SWISSPROTRELEASE <-> EMBLNEW
read-link SWISSPROTRELEASE <-> PIR
read-link SWISSPROTRELEASE <-> PDB
read-link SWISSPROTRELEASE <-> OMIM
index-link SWISSPROTRELEASE <-> ENZYME
index-link SWISSPROTRELEASE <-> TAXONOMY
index-link SWISSPROTRELEASE <-> SWISSNEW
index-link SWISSPROTRELEASE <-> SPTREMBL
index-link SWISSPROTRELEASE <-> TREMBLNEW
read-link SWISSPROTRELEASE <-> INTERPRO
index-link SWALL <-> SWISSPROTRELEASE
index-link HOVERPRO <-> SWISSPROTRELEASE
index-link HOBACPRO <-> SWISSPROTRELEASE
index-link HOBACPROCG <-> SWISSPROTRELEASE
index-link SBASE <-> SWISSPROTRELEASE
read-link IPI <-> SWISSPROTRELEASE
read-link IMGT <-> SWISSPROTRELEASE
read-link IMGTHLA <-> SWISSPROTRELEASE
index-link ENSEMBL <-> SWISSPROTRELEASE
index-link ENSEMBLmouse <-> SWISSPROTRELEASE
index-link ENSEMBLfly <-> SWISSPROTRELEASE
index-link ENSEMBLzebrafish <-> SWISSPROTRELEASE
index-link ENSEMBLmosquito <-> SWISSPROTRELEASE
index-link ENSEMBLfugu <-> SWISSPROTRELEASE
index-link ENSEMBLcbriggsae <-> SWISSPROTRELEASE
index-link ENSEMBLcelegans <-> SWISSPROTRELEASE
index-link ENSEMBLrat <-> SWISSPROTRELEASE
read-link PROSITE <-> SWISSPROTRELEASE
read-link BLOCKS <-> SWISSPROTRELEASE
read-link PRODOM <-> SWISSPROTRELEASE
read-link PRODOMCG <-> SWISSPROTRELEASE
index-link DOMO <-> SWISSPROTRELEASE
read-link DOMOFASTA <-> SWISSPROTRELEASE
read-link PFAMA <-> SWISSPROTRELEASE
read-link PFAMB <-> SWISSPROTRELEASE
index-link SWISSPFAM <-> SWISSPROTRELEASE
index-link REBASE <-> SWISSPROTRELEASE
read-link TFFACTOR <-> SWISSPROTRELEASE
read-link LOCUSLINK <-> SWISSPROTRELEASE
read-link UNIGENE <-> SWISSPROTRELEASE
read-link HSSP <-> SWISSPROTRELEASE
read-link MTINVRT <-> SWISSPROTRELEASE
read-link FLYCLONES <-> SWISSPROTRELEASE
read-link FLYGENES <-> SWISSPROTRELEASE
read-link SGD <-> SWISSPROTRELEASE
index-link HSAGENES <-> SWISSPROTRELEASE
read-link BLASTP <-> SWISSPROTRELEASE
read-link BLASTX <-> SWISSPROTRELEASE
read-link RPSBLAST <-> SWISSPROTRELEASE
read-link FASTA <-> SWISSPROTRELEASE
read-link FASTX <-> SWISSPROTRELEASE
read-link FASTY <-> SWISSPROTRELEASE
read-link SSEARCH <-> SWISSPROTRELEASE
read-link CLUSTALW <-> SWISSPROTRELEASE
index-link IPRMATCHES <-> SWISSPROTRELEASE
Directory:
"/db/swissprot/SP/"
Filenames(s):
sprot.dat 419638074
getz '[swissprot-id:acha_human]' -e
ID ACHA_HUMAN STANDARD; PRT; 482 AA.
AC P02708;
DT 21-JUL-1986 (REL. 01, CREATED)
DT 01-AUG-1990 (REL. 15, LAST SEQUENCE UPDATE)
DT 01-OCT-1996 (REL. 34, LAST ANNOTATION UPDATE)
DE ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
GN CHRNA1 OR CHNRA OR ACHRA.
OS HOMO SAPIENS (HUMAN).
OC EUKARYOTA; METAZOA; CHORDATA; VERTEBRATA; TETRAPODA; MAMMALIA;
OC EUTHERIA; PRIMATES.
RN [1]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RX MEDLINE; 84039794.
RA NODA M., FURUTANI Y., TAKAHASHI H., TOYOSATO M., TANABE T.,
RA SHIMIZU S.,KIKYOTANI S.,KAYANO T.,HIROSE T.,INAYAMA S.,NUMA S.;
RL NATURE 305:818-823(1983).
RN [2]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RX MEDLINE; 88112190.
RA SCHOEPFER R., LUTHER M., LINDSTROM J.M.;
RL FEBS LETT. 226:235-240(1988).
RN [3]
RP SEQUENCE OF 21-482 (ISOFORM 1).
RX MEDLINE; 88139764.
RA HOHLFELD R., TOYKA K.V., MINER L.L., WALGRAVE S.L.,
RA CONTI-TRONCONI B.M.;
RL J. CLIN. INVEST. 81:657-660(1988).
RN [4]
RP SEQUENCE FROM N.A. (ISOFORM 2).
RC TISSUE=MUSCLE;
RX MEDLINE; 90291973.
RA BEESON D., MORRIS A., VINCENT A., NEWSOM-DAVIS J.;
RL EMBO J. 9:2101-2106(1990).
RN [5]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RC TISSUE=THYMUS;
RX MEDLINE; 95242389.
RA GATTENLOEHNER S., BRABLETZ T., SCHULTZ A., MARX A.,
RA MUELLER-HERMELINK H.-K., KIRCHNER T.;
RL THYMUS 23:103-113(1994).
RN [6]
RP SEQUENCE OF 78-113 FROM N.A. (ISOFORM 2).
RX MEDLINE; 93181196.
RA TALIB S., OKARMA T.B., LEBKOWSKI J.S.;
RL NUCLEIC ACIDS RES. 21:233-237(1993).
CC -!- FUNCTION: AFTER BINDING ACETYLCHOLINE, THE ACHR RESPONDS BY AN
CC EXTENSIVE CHANGE IN CONFORMATION THAT AFFECTS ALL SUBUNITS AND
CC LEADS TO OPENING OF AN ION-CONDUCTING CHANNEL ACROSS THE PLASMA
CC MEMBRANE.
CC -!- SUBUNIT:PENTAMER OF TWO ALPHA CHAINS, AND ONE EACH OF THE BETA,
CC DELTA, AND GAMMA (IN IMMATURE MUSCLE) OR EPSILON (IN MATURE
CC MUSCLE) CHAINS.
CC -!- SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN.
CC -!-TISSUE SPECIFICITY:ISOFORM 1 IS DIFFERENTIALLY EXPRESSED ONLY IN
CC THE SKELETAL MUSCLE,WHEREAS ISOFORM 2 IS CONSTITUTIVELY EXPRESSED
CC IN SKELETAL MUSCLE, BRAIN, HEART, KIDNEY, LIVER LUNG AND THYMUS.
CC -!- ALTERNATIVE PRODUCTS: TWO FORMS OF ACETYLCHOLINE RECEPTOR ALPHA
CC CHAIN ARE FOUND: ISOFORM 1 AND ISOFORM 2 WHICH DIFFER BY THE
CC INSERTION OF A 25-RESIDUE DOMAIN.THE SEQUENCE SHOWN HERE IS THAT
CC OF ISOFORM 2.
CC -!-DISEASE:THE ALPHA SUBUNIT IS THE MAIN FOCUS FOR ANTIBODY BINDING
CC IN MYASTHENIA GRAVIS.
CC -!- SIMILARITY: BELONGS TO THE LIGAND-GATED IONIC CHANNELS FAMILY.
DR EMBL; Y00762; G28309; -.
DR EMBL; X17104; E21966; -.
DR EMBL; X02502; G669153; -.
DR EMBL; X02503; G669153; JOINED.
DR EMBL; X02504; G669153; JOINED.
DR EMBL; X02505; G669153; JOINED.
DR EMBL; X02506; G669153; JOINED.
DR EMBL; X02507; G669153; JOINED.
DR EMBL; X02508; G669153; JOINED.
DR EMBL; S77094; E199494; -.
DR EMBL; X70108; G312471; ALT_SEQ.
DR PIR; A03168; ACHUA1.
DR PIR; S10148; S10148.
DR MIM; 100690; -.
DR MIM; 254210; -.
DR PROSITE; PS00236; NEUROTR_ION_CHANNEL.
DR PRODOM; ACHA_HUMAN;
DR SWISS-2DPAGE; ACHA_HUMAN;
DR SWISS-3DIMAGE; ACHA_HUMAN;
KW RECEPTOR; POSTSYNAPTIC MEMBRANE; IONIC CHANNEL;GLYCOPROTEIN;SIGNAL;
KW ALTERNATIVE SPLICING; TRANSMEMBRANE.
FT SIGNAL 1 20
FT CHAIN 21 482 ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA.
FT DOMAIN 21 255 EXTRACELLULAR.
FT TRANSMEM 256 280
FT TRANSMEM 288 306
FT TRANSMEM 322 341
FT DOMAIN 342 453 CYTOPLASMIC.
FT TRANSMEM 454 472
FT DISULFID 173 187
FT DISULFID 237 238 ASSOCIATED WITH RECEPTOR ACTIVATION.
FT CARBOHYD 186 186 PROBABLE.
FT VARSPLIC 79 103 MISSING (IN ISOFORM 1).
FT CONFLICT 415 415 P -> F (IN REF. 5).
SQ SEQUENCE 482 AA; 54545 MW; E050B513 CRC32;
>ACHA_HUMAN
MEPWPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQL
INVDEVNQIVTTNVRLKQGDMVDLPRPSCVTLGVPLFSHLQNEQWVDYNLKWNPDDYGGV
KKIHIPSEKIWRPDLVLYNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHF
PFDEQNCSMKLGTWTYDGSVVAINPESDQPDLSNFMESGEWVIKESRGWKHSVTYSCCPD
TPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTV
FLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPNWVRKV
FIDTIPNIMFFSTMKRPSREKQDKKIFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSA
IEGIKYIAETMKSDQESNNAAAEWKYVAMVMDHILLGVFMLVCIIGTLAVFAGRLIELNQ
QG
getz '[swissprot-id:acha_human]' -f des
DE ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
getz '[swissprot-id:acha_human]' -f 'aut des seq'
DE ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
RA NODA M., FURUTANI Y., TAKAHASHI H., TOYOSATO M., TANABE T.,
RA SHIMIZU S.,KIKYOTANI S.,KAYANO T.,HIROSE T.,INAYAMA S.,NUMA S.;
RA SCHOEPFER R., LUTHER M., LINDSTROM J.M.;
RA HOHLFELD R., TOYKA K.V., MINER L.L., WALGRAVE S.L.,
RA CONTI-TRONCONI B.M.;
RA BEESON D., MORRIS A., VINCENT A., NEWSOM-DAVIS J.;
RA GATTENLOEHNER S., BRABLETZ T., SCHULTZ A., MARX A.,
RA MUELLER-HERMELINK H.-K., KIRCHNER T.;
RA TALIB S., OKARMA T.B., LEBKOWSKI J.S.;
>ACHA_HUMAN
MEPWPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQL
INVDEVNQIVTTNVRLKQGDMVDLPRPSCVTLGVPLFSHLQNEQWVDYNLKWNPDDYGGV
KKIHIPSEKIWRPDLVLYNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHF
PFDEQNCSMKLGTWTYDGSVVAINPESDQPDLSNFMESGEWVIKESRGWKHSVTYSCCPD
TPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTV
FLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPNWVRKV
FIDTIPNIMFFSTMKRPSREKQDKKIFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSA
IEGIKYIAETMKSDQESNNAAAEWKYVAMVMDHILLGVFMLVCIIGTLAVFAGRLIELNQ
QG
getz '[swissprot-id:acha_human]' -e -sf gcg
ID ACHA_HUMAN STANDARD; PRT; 482 AA.
AC P02708;
DT 21-JUL-1986 (REL. 01, CREATED)
DT 01-AUG-1990 (REL. 15, LAST SEQUENCE UPDATE)
DT 01-OCT-1996 (REL. 34, LAST ANNOTATION UPDATE)
DE ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN PRECURSOR.
GN CHRNA1 OR CHNRA OR ACHRA.
OS HOMO SAPIENS (HUMAN).
OC EUKARYOTA; METAZOA; CHORDATA; VERTEBRATA; TETRAPODA; MAMMALIA;
OC EUTHERIA; PRIMATES.
RN [1]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RX MEDLINE; 84039794.
RA NODA M., FURUTANI Y., TAKAHASHI H., TOYOSATO M., TANABE T.,
RA SHIMIZU S.,KIKYOTANI S.,KAYANO T.,HIROSE T.,INAYAMA S.,NUMA S.;
RL NATURE 305:818-823(1983).
RN [2]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RX MEDLINE; 88112190.
RA SCHOEPFER R., LUTHER M., LINDSTROM J.M.;
RL FEBS LETT. 226:235-240(1988).
RN [3]
RP SEQUENCE OF 21-482 (ISOFORM 1).
RX MEDLINE; 88139764.
RA HOHLFELD R., TOYKA K.V., MINER L.L., WALGRAVE S.L.,
RA CONTI-TRONCONI B.M.;
RL J. CLIN. INVEST. 81:657-660(1988).
RN [4]
RP SEQUENCE FROM N.A. (ISOFORM 2).
RC TISSUE=MUSCLE;
RX MEDLINE; 90291973.
RA BEESON D., MORRIS A., VINCENT A., NEWSOM-DAVIS J.;
RL EMBO J. 9:2101-2106(1990).
RN [5]
RP SEQUENCE FROM N.A. (ISOFORM 1).
RC TISSUE=THYMUS;
RX MEDLINE; 95242389.
RA GATTENLOEHNER S., BRABLETZ T., SCHULTZ A., MARX A.,
RA MUELLER-HERMELINK H.-K., KIRCHNER T.;
RL THYMUS 23:103-113(1994).
RN [6]
RP SEQUENCE OF 78-113 FROM N.A. (ISOFORM 2).
RX MEDLINE; 93181196.
RA TALIB S., OKARMA T.B., LEBKOWSKI J.S.;
RL NUCLEIC ACIDS RES. 21:233-237(1993).
CC -!- FUNCTION: AFTER BINDING ACETYLCHOLINE, THE ACHR RESPONDS BY AN
CC EXTENSIVE CHANGE IN CONFORMATION THAT AFFECTS ALL SUBUNITS AND
CC LEADS TO OPENING OF AN ION-CONDUCTING CHANNEL ACROSS THE PLASMA
CC MEMBRANE.
CC -!- SUBUNIT:PENTAMER OF TWO ALPHA CHAINS, AND ONE EACH OF THE BETA,
CC DELTA, AND GAMMA (IN IMMATURE MUSCLE) OR EPSILON (IN MATURE
CC MUSCLE) CHAINS.
CC -!- SUBCELLULAR LOCATION: INTEGRAL MEMBRANE PROTEIN.
CC -!-TISSUE SPECIFICITY:ISOFORM 1 IS DIFFERENTIALLY EXPRESSED ONLY IN
CC THE SKELETAL MUSCLE,WHEREAS ISOFORM 2 IS CONSTITUTIVELY EXPRESSED
CC IN SKELETAL MUSCLE, BRAIN, HEART, KIDNEY, LIVER LUNG AND THYMUS.
CC -!-ALTERNATIVE PRODUCTS: TWO FORMS OF ACETYLCHOLINE RECEPTOR ALPHA
CC CHAIN ARE FOUND: ISOFORM 1 AND ISOFORM 2 WHICH DIFFER BY THE
CC INSERTION OF A 25-RESIDUE DOMAIN.THE SEQUENCE SHOWN HERE IS THAT
CC OF ISOFORM 2.
CC -!-DISEASE:THE ALPHA SUBUNIT IS THE MAIN FOCUS FOR ANTIBODY BINDING
CC IN MYASTHENIA GRAVIS.
CC -!- SIMILARITY: BELONGS TO THE LIGAND-GATED IONIC CHANNELS FAMILY.
DR EMBL; Y00762; G28309; -.
DR EMBL; X17104; E21966; -.
DR EMBL; X02502; G669153; -.
DR EMBL; X02503; G669153; JOINED.
DR EMBL; X02504; G669153; JOINED.
DR EMBL; X02505; G669153; JOINED.
DR EMBL; X02506; G669153; JOINED.
DR EMBL; X02507; G669153; JOINED.
DR EMBL; X02508; G669153; JOINED.
DR EMBL; S77094; E199494; -.
DR EMBL; X70108; G312471; ALT_SEQ.
DR PIR; A03168; ACHUA1.
DR PIR; S10148; S10148.
DR MIM; 100690; -.
DR MIM; 254210; -.
DR PROSITE; PS00236; NEUROTR_ION_CHANNEL.
DR PRODOM; ACHA_HUMAN;
DR SWISS-2DPAGE; ACHA_HUMAN;
DR SWISS-3DIMAGE; ACHA_HUMAN;
KW RECEPTOR;POSTSYNAPTIC MEMBRANE;IONIC CHANNEL;GLYCOPROTEIN;SIGNAL;
KW ALTERNATIVE SPLICING; TRANSMEMBRANE.
FT SIGNAL 1 20
FT CHAIN 21 482 ACETYLCHOLINE RECEPTOR PROTEIN,ALPHA.
FT DOMAIN 21 255 EXTRACELLULAR.
FT TRANSMEM 256 280
FT TRANSMEM 288 306
FT TRANSMEM 322 341
FT DOMAIN 342 453 CYTOPLASMIC.
FT TRANSMEM 454 472
FT DISULFID 173 187
FT DISULFID 237 238 ASSOCIATED WITH RECEPTOR ACTIVATION.
FT CARBOHYD 186 186 PROBABLE.
FT VARSPLIC 79 103 MISSING (IN ISOFORM 1).
FT CONFLICT 415 415 P -> F (IN REF. 5).
SQ SEQUENCE 482 AA; 54545 MW; E050B513 CRC32;
ACHA_HUMAN Length: 482 Check: 6077 ..
1 MEPWPLLLLF SLCSAGLVLG SEHETRLVAK LFKDYSSVVR PVEDHRQVVE VTVGLQLIQL
61 INVDEVNQIV TTNVRLKQGD MVDLPRPSCV TLGVPLFSHL QNEQWVDYNL KWNPDDYGGV
121 KKIHIPSEKI WRPDLVLYNN ADGDFAIVKF TKVLLQYTGH ITWTPPAIFK SYCEIIVTHF
181 PFDEQNCSMK LGTWTYDGSV VAINPESDQP DLSNFMESGE WVIKESRGWK HSVTYSCCPD
241 TPYLDITYHF VMQRLPLYFI VNVIIPCLLF SFLTGLVFYL PTDSGEKMTL SISVLLSLTV
301 FLLVIVELIP STSSAVPLIG KYMLFTMVFV IASIIITVIV INTHHRSPST HVMPNWVRKV
361 FIDTIPNIMF FSTMKRPSRE KQDKKIFTED IDISDISGKP GPPPMGFHSP LIKHPEVKSA
421 IEGIKYIAET MKSDQESNNA AAEWKYVAMV MDHILLGVFM LVCIIGTLAV FAGRLIELNQ
481 QG
getz '[prosite-des:protease]>swissprot' -f 'id des'
ID ALB1_PSOTE STANDARD; PRT; 175 AA.
DE ALBUMIN-1 (WBA-1).
ID ASP_THECC STANDARD; PRT; 221 AA.
DE 21 KD SEED PROTEIN PRECURSOR.
ID CUTF_ECOLI STANDARD; PRT; 236 AA.
DE COPPER HOMEOSTASIS PROTEIN CUTF PRECURSOR (LIPOPROTEIN NLPE).
...
ID YCF1_OENBE STANDARD; PRT; 1005 AA.
DE HYPOTHETICAL PROTEIN (ORF 1005) (FRAGMENT).
ID YKD4_YEAST STANDARD; PRT; 758 AA.
DE HYPOTHETICAL 87.9 KD PROTEIN PRECURSOR IN PTM-IRX1 INTERGENIC REGION.
