Completed Microbial Genomes

COMPLETE MICROBIAL GENOMES

BLAST2 on Complete genomes at INFOBIOGEN
(Select BLASTN or TBLASTN and "Genomes Complets")
FASTA on Complete genomes at INFOBIOGEN
(Select FASTA or TFASTA or TFASTX and "Genomes Complets")

Updated, April 6, 2004

Genome
Taxonomy NCBI Size (Mb) Base pairs Date SRS
Accession Séquences
(FASTA) (*) ID

1 Mycoplasma genitalium 0.58 580,073 Jan 23, 1998 L43967 mgen.seq mgen.mne

2 Haemophilus influenzae 1.83 1,830,135 Jan 23, 1998 L42023 hin.seq hin.mne

3 Methanococcus jannaschii 1.66 1,664,970 May 30, 1998 L77117 mjan.seq mjan.mne

4 Synechocystis sp 3.57 3,573,470 Jan 23, 1998 AB001339 gsyn.seq gsyn.mne

5 Mycoplasma pneumoniae M129 0.81 816,444 Jan 23, 1998 U00089 mpne.seq mpne.mne

6 Escherichia coli 4.63 4,638,858 Jan 23, 1998 U00096 ecoli.seq ecoli.mne

7 Helicobacter pylori strain 26695 1.66 1,667,867 Jun 2, 1998 AE000511 hpyl.seq hpyl.mne

8 Archaeoglobus fulgidus 2.17 2,178,400 Jan 23, 1998 AE000782 aful.seq aful.mne

9 Methanobacterium
thermoautotrophicum 1.75 1,751,377 Jan 23, 1998 AE000666 mthe.seq mthe.mne

10 Bacillus subtilis 4.21 4,214,814 Jan 23, 1998 AL009126 bsub.seq bsub.mne

11 Borrelia burgdorferi 0.91 914,726 Apr 16, 1998 AE000783 bbur.seq bbur.mne

12 Aquifex aeolicus 1.59 1,595,349 May 30, 1998 AE000657 aaeo.seq aaeo.mne

13 Pyrococcus horikoshii 1.73 1,738,505 May 30, 1998 AP000001 phor.seq phor.mne

14 Mycobacterium tuberculosis H37Rv 4.42 4,420,017 Jun 29, 1998 AL123456 mt.seq mt.mne

15 Treponema pallidum 1.14 1,143,171 Jul 18, 1998 AE000520 tpal.seq tpal.mne

16 Chlamydia trachomatis 1.04 1,047,739 Sep 2, 1998 AE001273 ctra.seq ctra.mne

17 Rickettsia prowazekii 1.11 1,110,773 Nov 15, 1998 AJ235269 rpro.seq rpro.mne

18 Helicobacter pylori strain J99 1.64 1,643,831 Jan 17, 1999 AE001439 hpyl2.seq hpyl2.mne

19 Chlamydia pneumonia 1.23 1,236,350 Mar 16, 1999 AE001363 cpne.seq cpne.mne

20 Pyrococcus abyssi 1.76 1.765,118 July, 1999 AL096836 paby.seq paby.mne

21 Thermotoga maritima 1.8 1,860,725 June 2, 1999 AE000512 tmar.seq tmar.mne

22 Aeropyrum pernix 1.7 1,669,695 June 24, 1999 AP000058 aper.seq aper.mne

23 Deinococcus radiodurans R1 3.0 3,074,955 November 24,1999 AE001825 drad.seq drad.mne

24 Ureaplasma urealyticum 0.8 755,199 February 7, 2000 AE002100 uure.seq uure.mne

25 Campylobacter jejuni NCTC11168 1.7 1,641,481 Feb 14, 2000 CJ11168X1 cjej.seq cjej.mne

26 Chlamydia muridarum 1.08 1,082,508 Mar 10, 2000 AE002269 cmur.seq cmur.mne

27 Chlamydophila pneumoniae AR39 1.24 1,236,093 Mar 10, 2000 AE002164 cppn.seq cppn.mne

28 Neisseria meningitidis MC58 2.3 2,284,651 Mar 13, 2000 AE002098 nmen.seq nmen.mne

29 Neisseria meningitidis Z2491 2.3 2,184,918 Apr 6, 2000 AL162752 nm.seq nm.mne

30 Xylella fastidiosa 2.7 2,729,130 July 15, 2000 AE003850 xfas.seq xfas.mne

31 Vibrio cholerae N16961 El Tor 4.0 4,057,596 Aug 5, 2000 AE003852 vcho.seq vcho.mne

32 Pseudomonas aeruginosa PAO1 6.2 6,,264,403 Sep 7, 2000 AE004091 paer.seq paer.mne

33 Bacillus halodurans C-125 4.2 4,203,003 Sep 17, 2000 BA000004 bhal.seq bhal.mne

34 Halobacterium sp. NRC-1 2.0 2,024,379 Oct 6, 2000 AE004437 hals.seq hals.mne

35 Thermoplasma acidophilum 1.56 1,565,106 Oct 6, 2000 AL139299 taci.seq taci.mne

36 Chlamydophila pneumoniae CWL029 1.2 1,200 000 Dec 11, 2000 AE001586 cppp.seq cppp.mne

37 Chlamydophila pneumoniae J138 1.2 1,200 000 Dec 11, 2000 AP002545 cppo.seq cppo.mne

38 Thermoplasma volcanium GSS1 1.6 1,585,104 Dec 25, 2000 AP000991 tvol.seq tvol.mne

39 Mesorhizobium loti 7.3 7,036,071 Jan 2, 2001 AP002994 mlot.seq mlot.mne

40 Escherichia coli O157:H7 5.5 5,500,666 Jan 27, 2001 AE005174 ecoo.seq ecoo.mne

41 Pasteurella multocida PM70 2.2 ? 2,269,587 Feb 7, 2001 AE006034 pmul.seq pmul.mne

42 Lactococcus lactis subsp. lactis IL1403 2.3 2,378,519 Feb 12, 2001 AE006239 llac.seq llac.mne

43 Mycobacterium leprae 2.8 3,268,203 Feb 23, 2001 AL450380 mlep.seq mlep.mne

44 Escherichia coli O157:H7 sub RIMD 0509952 5.5 5,499,400 Mar 22, 2001 BA000007 ecop.seq ecop.mne

45 Caulobacter crescentus 4 4,038,387 Mar 23, 2001 AE005673 ccre.seq ccre.mne

46 Streptococcus pyogenes strain SF370 serotype M1 1,8 1,852,442 Apr 17, 2001 AE004092 spyo.seq spyo.mne

47 Staphylococcus aureus (strain:N315) 2,8 2,838,744 Apr 23, 2001 BA000018 saun.seq saun.mne

48 Staphylococcus aureus (strain:Mu50) 2,8 2,878,484 Apr 30, 2001 BA000017 sauo.seq sauo.mne

49 Sulfolobus solfataricus 3.0 3,008,365 Apr 30, 2001 AE006641 ssol.seq ssol.mne

50 Mycobacterium tuberculosis CDC1551 4,4 4,420,576 May 2, 2001 AE000516 mtuc.seq mtuc.mne

51 Mycoplasma pulmonis (strain UAB CTIP) 0.93 963,979 May 17, 2001 AL445566 mpul.seq mpul.mne

52 Sinorhizobium meliloti plasmid pSymA 1.3 1,361,426 Jul 14, 2001 AE007195 smel.seq smel.mne

53 Clostridium acetobutylicum ATCC824 4.5 4,155,410 Jul 30, 2001 AE001437 cace.seq cace.mne

54 Sinorhizobium meliloti chromosome 3.6 3,654,685 Aug 3, 2001 AL591688 smec.seq smec.mne

55 Agrobacterium tumefaciens strain C58 circular chromosome 2.8 2,856,721 Aug 21, 2001 AE007869 atum.seq atum.mne

56 Streptococcus pneumoniae TIGR4 2.2 2,172,327 Sep 2, 2001 AE005672 spne.seq spne.mne

57 Streptococcus pneumoniae R6 2.0 2,049,595 Sep 9, 2001 AE007317 spnf.seq spnf.mne

58 Sulfolobus tokodaii 2.6 2,695,206 Sep 19, 2001 BA000023 stok.seq stok.mne

59 Rickettsia conorii Malish 7 1.3 1,275,535 Sep 19, 2001 AE006914 rcon.seq rcon.mne

60 Agrobacterium tumefaciens strain C58 linear chromosome 2.0 2,085,892 Sep 21, 2001 AE007870 atul.seq atul.mne

61 Yersinia pestis strain CO92 4.6 4,654,678 Oct 6, 2001 AL590842 ypes.seq ypes.mne

62 Listeria innocua Clip11262 3.0 3,011,758 Oct 27, 2001 AL592022 linn.seq linn.mne

63 Listeria monocytogenes strain EGD 2.9 2,945,078 Oct 27, 2001 AL591824 lmon.seq lmon.mne

64 Salmonella typhimurium LT2 4.8 4,870,812 Oct 28, 2001 AE006468 sthy.seq sthy.mne

65 Salmonella enterica serovar Typhi 4.8 4,809,987 Oct 28, 2001 AL513382 sthi.seq sthi.mne

66 Nostoc sp PCC 7120 6.4 6,414,671 Nov 30, 2001 BA000020 nost.seq nost.mne

67 Brucella melitensis strain 16M chromosomes I and II 3.3 3,312,931 Dec 29, 2001 AE008917 AE008918 bmel.seq bmel.mne

68 Clostridium perfringens 3.0 3,031,880 Jan 16, 2002 BA000016 cper.seq cper.mne

69 Pyrobaculum aerophilum strain IM2 2.2 2,234,390 Jan 18, 2002 AE009441 pyra.seq pyra.mne

70 Ralstonia solanacearum GMI1000 5.8 5,812,322 Feb 01, 2002 AL646052 AL646053 rsol.seq rsol.mne

71 Pyrococcus furiosus DSM 3638 1.9 1,918,246 Feb 27, 2002 AE009950 pfur.seq pfur.mne

72 Wigglesworthia brevipalpis 0.7 697,721 Mar 4, 2002 BA000021 wbre.seq wbre.mne

73 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 2.1 2,186,280 Mar 27, 2002 AE009951 fnum.seq fnum.mne

74 Streptococcus pyogenes strain MGAS8232 1,9 1,905,297 Mar 29, 2002 AE009949 spyg.seq spyg.mne

75 Methanopyrus kandleri AV19 1.7 1,703,889 Apr 4, 2002 AE009439 mkan.seq mkan.mne

76 Methanosarcina acetivorans str. C2A 5.7 5,783,472 Apr 5, 2002 AE010299 mace.seq mace.mne

77 Thermoanaerobacter tengcongensis strain MB4T 2.7 2,703,405 May 9, 2002 AE008691 tten.seq tten.mne

78 Streptomyces coelicolor 8.0 8,707,150 May 9, 2002 AL645882 scoe.seq scoe.mne

79 Methanosarcina mazei strain Goe1 4.1 4,119,025 May 21, 2002 AE008384 mmaz.seq mmaz.mne

80 Xanthomonas campestris pv. str. ATCC 33913 5.1 5,103,728 May 29, 2002 AE008922 xcam.seq xcam.mne

81 Xanthomonas axonopodis pv. citri str. 306 5.2 5,203,494 May 29, 2002 AE008923 xaxo.seq xaxo.mne

82 Staphylococcus aureus (strain:MW2) 2,8 2,841,566 May 30, 2002 BA000033 sauw.seq sauw.mne

83 Corynebacterium glutamicum ATCC 13032 3.3 3,309,851 June 6, 2002 BA000036 cglu.seq cglu.mne

84 Buchnera aphidicola str. 0.6 644,814 July 3, 2002 AE013218 baph.seq baph.mne

85 Chlorobium tepidum TLS 2.1 2,166,446 July 4, 2002 AE006470 ctet.seq ctet.mne

86 Streptococcus pyogenes strain MGAS315 1,9 1,902,681 Jul 20, 2002 AE014074 spyq.seq spyq.mne

87 Yersinia pestis strain KIM 4.6 4,625,545 Jul 29, 2002 AE009952 ypet.seq ypet.mne

88 Thermosynechococcus elongatus BP-1 2.5 2,594,257 Aug 31, 2002 BA000039 telo.seq telo.mne

89 Oceanobacillus iheyensis 3,5 3,631,128 Sep 14, 2002 BA000028 oihe.seq oihe.mne

90 Streptococcus agalactiae NEM316 1,3 1,313,350 Sep 19, 2002 AL732656 saga.seq saga.mne

91 Streptococcus agalactiae serotype V 2,1 2,166,207 Sep 19, 2002 AE009948 sagv.seq sagv.mne

92 Bifidobacterium longum NCC2705 2.2 2,268,766 Sep 27, 2002 AE014295 blon.seq blon.mne

93 Brucella suis 1330 chr II 1.2 1,213,801 Oct 4, 2002 AE014292 bsui.seq bsui.mne

94 Corynebacterium efficiens YS-314 3.1 3,147,590 Oct 5, 2002 BA000035 ceff.seq ceff.mne

95 Shigella flexneri 2a str. 301 4.6 4,631,693 Oct 18, 2002 AE005674 sfle.seq sfle.mne

96 Streptococcus mutans UA159 2.0 2,031,491 Oct 28, 2002 AE014133 smut.seq smut.mne

97 Shewanella oneidensis MR-1 5.0 4,996,813 Dec 05, 2002 AE014299 sone.seq sone.mne

98 Pseudomonas putida KT2440 6.1 6,183,063 Dec 16, 2002 AE015451 pput.seq pput.mne

99 Mycoplasma penetrans 1.4 1,358,833 Dec 16, 2002 BA000026 mpen.seq mpen.mne

100 Vibrio vulnificus CMCP6 5.2 5,127,698 Dec 26, 2002 AE016795 AE016796 vvul.seq vvul.mne

101 Bradyrhizobium japonicum 9.1 9,107,328 Dec 26, 2002 BA000040 bjap.seq bjap.mne

102 Escherichia coli CFT073 5.2 5,232,448 Dec 26, 2002 AE014075 ecoq.seq ecoq.mne

103 Staphylococcus epidermidis ATCC 12228 2.5 2,499,759 Jan 3, 2003 AE015929 sepi.seq sepi.mne

104 Clostridium tetani E88 2.8 2,799,791 Feb 8, 2003 AE015927 cttn.seq cttn.mne

105 Lactobacillus plantarum strain WCFS1 3.3 3,308,774 Feb 9, 2003 AL935263 lpla.seq lpla.mne

106 Xylella fastidiosa Temecula1 2.5 2,520,282 Feb 9, 2003 AE015929 xfat.seq xfat.mne

107 Tropheryma whipplei TW08/27 0.9 926,038 Feb 19, 2003 BX072543 twhi.seq twhi.mne

108 Vibrio parahaemolyticus 5.1 5,166,520 Mar 7,2003 BA000031 BA000032 vpar.seq vpar.mne

109 Coxiella burnetii strain RSA 493 1.9 1,995,635 Apr 6,2003 AE016828 cbur.seq cbur.mne

110 Streptomyces avermitilis 9.0 9,027,058 Apr 9,2003 BA000030 save.seq save.mne

111 Chlamydophila caviae GPIC 1.1 1,173,570 Apr 16, 2003 AE015925 ccav.seq ccav.mne

112 Bacillus subtilis 5.4 5,412,829 Apr 17, 2003 AE016877 bcer.seq bcer.mne

113 Leptospira interrogans serovar lai str. 56601 4.3 4,355,921 Apr 30, 2003 AE010300 lint.seq lint.mne

114 Nitrosomonas europaea ATCC 19718 2.8 2,812,544 May 5, 2003 AL954747 neur.seq neur.mne

115 Bacillus anthracis str. Ames 5.2 5,228,313 May 5, 2003 AE016879 bant.seq bant.mne

116 Mycoplasma gallisepticum strain R 0.9 996,602 June, 11, 2003 AE015450 mgal.seq mgal.mne

117 Mycobacterium bovis AF2122/97 4.3 4,346,142 June, 13, 2003 BX248333 mbov.seq mbov.mne

118 Helicobacter hepaticus ATCC 51449 1.8 1,799,446 Jun 28, 2003 AE017125 hhep.seq hhep.mne

119 Pirellula sp. strain 1 7.1 7,146,726 Jun 30, 2003 BX119912 pisp.seq pisp.mne

120 Haemophilus ducreyi 35000HP 1.6 1,699,255 Aug 4, 2003 AE017143 hduc.seq hduc.mne

121 Chlamydophila pneumoniae TW-183 i1.2 1,226,115 Aug 4, 2003 AE009440 cpnt.seq cpnt.mne

122 Prochlorococcus marinus subsp. marinus str. CCMP1375 1.7 1,751,380 Aug 4, 2003 AE017126 pmas.seq pmas.mne

123 Prochlorococcus marinus MED4 1.6 1,658,190 Aug 19, 2003 BX548174 pmar.seq pmar.mne

124 Prochlorococcus marinus MIT9313 2.4 2,411,173 Aug 19, 2003 BX548175 pmat.seq pmat.mne

125 Tropheryma whipplei str. Twist 0.9 927,423 Aug 19, 2003 AE014184 twht.seq twht.mne

126 Synechococcus sp. WH8102 2.4 2,434,728 Aug 19, 2003 BX548020 syns.seq syns.mne

128 Bordetella pertussis strain Tohama I 4.1 4,086,739 Aug 19, 2003 BX640420 bper.seq bper.mne

129 Bordetella bronchiseptica strain RB50 5.3 5,339,929 Aug 19, 2003 BX470250 bbro.seq bbro.mne

130 Bordetella parapertussis strain 12822 4.8 4,774,201 Aug 19, 2003 BX470249 bpar.seq bpar.mne

131 Chromobacterium violaceum ATCC 12472 4.7 4,751,980 Aug 31, 2003 AE016825 cvio.seq cvio.mne

132 Porphyromonas gingivalis W83 2.3 2,343,896 Sep 4, 2003 AE015924 pgiv.seq pgiv.mne

133 Pseudomonas syringae pv. tomato str. DC3000 6.4 6,398,326 Sep 5, 2003 AE016853 psyn.seq psyn.mne

134 Wolinella succinogenes 2.1 2,110,655 Sep 8, 2003 BX571656 wsuc.seq wsuc.mne

135 Gloeobacter violaceus PCC 7421 4.6 4,659,769 Sep 28, 2003 BA000045 gvio.seq gvio.mne

136 Photorhabdus luminescens subsp. laumondii TTO1 5.6 5,689,787 Sep 30, 2003 BX470251 plum.seq plum.mne

137 Geobacter sulfurreducens PCA 4.4 4,426,126 Dec 30, 2003 AE017180 gsul.seq gsul.mne

138 Nanoarchaeum equitans Kin4-M 0.5 490,885 Dec 30, 2003 AE017199 nequ.seq nequ.mne

139 Bdellovibrio bacteriovorus 3.7 3,783,450 Feb 5, 2004 BX842601 bbac.seq bbac.mne

140 Lactobacillus johnsonii NCC 533 1.9 1,993,036 Feb 5, 2004 AE017198 ljoh.seq ljoh.mne

141 Mycobacterium avium subsp. paratuberculosis str. k10 4.8 4,830,681 Feb 5, 2004 AE016958 mavi.seq mavi.mne

142 Treponema denticola ATCC 35405 2.8 2,843,741 Feb, 9, 2004 AE017226 tden.seq tden.mne

143 Wolbachia endosymbiont 1.2 1,268,022 Feb, 13, 2004 AE01722 6 wend.seq wend.mne

144 Mycoplasma mycoides subsp. mycoides SC 0.3 347,558 Feb, 13, 2004 BX293980 mmyc.seq mmyc.mne

145 Thermus thermophilus HB27 1.8 1,895,237 Apr 6, 2004 AE017221 tthe.seq tthe.mne

	Genome Taxonomy NCBI	Size (Mb)	Base pairs	Date	SRS Accession	Séquences (FASTA) (*)	ID
1	Mycoplasma genitalium	0.58	580,073	Jan 23, 1998	L43967	mgen.seq	mgen.mne
2	Haemophilus influenzae	1.83	1,830,135	Jan 23, 1998	L42023	hin.seq	hin.mne
3	Methanococcus jannaschii	1.66	1,664,970	May 30, 1998	L77117	mjan.seq	mjan.mne
4	Synechocystis sp	3.57	3,573,470	Jan 23, 1998	AB001339	gsyn.seq	gsyn.mne
5	Mycoplasma pneumoniae M129	0.81	816,444	Jan 23, 1998	U00089	mpne.seq	mpne.mne
6	Escherichia coli	4.63	4,638,858	Jan 23, 1998	U00096	ecoli.seq	ecoli.mne
7	Helicobacter pylori strain 26695	1.66	1,667,867	Jun 2, 1998	AE000511	hpyl.seq	hpyl.mne
8	Archaeoglobus fulgidus	2.17	2,178,400	Jan 23, 1998	AE000782	aful.seq	aful.mne
9	Methanobacterium thermoautotrophicum	1.75	1,751,377	Jan 23, 1998	AE000666	mthe.seq	mthe.mne
10	Bacillus subtilis	4.21	4,214,814	Jan 23, 1998	AL009126	bsub.seq	bsub.mne
11	Borrelia burgdorferi	0.91	914,726	Apr 16, 1998	AE000783	bbur.seq	bbur.mne
12	Aquifex aeolicus	1.59	1,595,349	May 30, 1998	AE000657	aaeo.seq	aaeo.mne
13	Pyrococcus horikoshii	1.73	1,738,505	May 30, 1998	AP000001	phor.seq	phor.mne
14	Mycobacterium tuberculosis H37Rv	4.42	4,420,017	Jun 29, 1998	AL123456	mt.seq	mt.mne
15	Treponema pallidum	1.14	1,143,171	Jul 18, 1998	AE000520	tpal.seq	tpal.mne
16	Chlamydia trachomatis	1.04	1,047,739	Sep 2, 1998	AE001273	ctra.seq	ctra.mne
17	Rickettsia prowazekii	1.11	1,110,773	Nov 15, 1998	AJ235269	rpro.seq	rpro.mne
18	Helicobacter pylori strain J99	1.64	1,643,831	Jan 17, 1999	AE001439	hpyl2.seq	hpyl2.mne
19	Chlamydia pneumonia	1.23	1,236,350	Mar 16, 1999	AE001363	cpne.seq	cpne.mne
20	Pyrococcus abyssi	1.76	1.765,118	July, 1999	AL096836	paby.seq	paby.mne
21	Thermotoga maritima	1.8	1,860,725	June 2, 1999	AE000512	tmar.seq	tmar.mne
22	Aeropyrum pernix	1.7	1,669,695	June 24, 1999	AP000058	aper.seq	aper.mne
23	Deinococcus radiodurans R1	3.0	3,074,955	November 24,1999	AE001825	drad.seq	drad.mne
24	Ureaplasma urealyticum	0.8	755,199	February 7, 2000	AE002100	uure.seq	uure.mne
25	Campylobacter jejuni NCTC11168	1.7	1,641,481	Feb 14, 2000	CJ11168X1	cjej.seq	cjej.mne
26	Chlamydia muridarum	1.08	1,082,508	Mar 10, 2000	AE002269	cmur.seq	cmur.mne
27	Chlamydophila pneumoniae AR39	1.24	1,236,093	Mar 10, 2000	AE002164	cppn.seq	cppn.mne
28	Neisseria meningitidis MC58	2.3	2,284,651	Mar 13, 2000	AE002098	nmen.seq	nmen.mne
29	Neisseria meningitidis Z2491	2.3	2,184,918	Apr 6, 2000	AL162752	nm.seq	nm.mne
30	Xylella fastidiosa	2.7	2,729,130	July 15, 2000	AE003850	xfas.seq	xfas.mne
31	Vibrio cholerae N16961 El Tor	4.0	4,057,596	Aug 5, 2000	AE003852	vcho.seq	vcho.mne
32	Pseudomonas aeruginosa PAO1	6.2	6,,264,403	Sep 7, 2000	AE004091	paer.seq	paer.mne
33	Bacillus halodurans C-125	4.2	4,203,003	Sep 17, 2000	BA000004	bhal.seq	bhal.mne
34	Halobacterium sp. NRC-1	2.0	2,024,379	Oct 6, 2000	AE004437	hals.seq	hals.mne
35	Thermoplasma acidophilum	1.56	1,565,106	Oct 6, 2000	AL139299	taci.seq	taci.mne
36	Chlamydophila pneumoniae CWL029	1.2	1,200 000	Dec 11, 2000	AE001586	cppp.seq	cppp.mne
37	Chlamydophila pneumoniae J138	1.2	1,200 000	Dec 11, 2000	AP002545	cppo.seq	cppo.mne
38	Thermoplasma volcanium GSS1	1.6	1,585,104	Dec 25, 2000	AP000991	tvol.seq	tvol.mne
39	Mesorhizobium loti	7.3	7,036,071	Jan 2, 2001	AP002994	mlot.seq	mlot.mne
40	Escherichia coli O157:H7	5.5	5,500,666	Jan 27, 2001	AE005174	ecoo.seq	ecoo.mne
41	Pasteurella multocida PM70	2.2 ?	2,269,587	Feb 7, 2001	AE006034	pmul.seq	pmul.mne
42	Lactococcus lactis subsp. lactis IL1403	2.3	2,378,519	Feb 12, 2001	AE006239	llac.seq	llac.mne
43	Mycobacterium leprae	2.8	3,268,203	Feb 23, 2001	AL450380	mlep.seq	mlep.mne
44	Escherichia coli O157:H7 sub RIMD 0509952	5.5	5,499,400	Mar 22, 2001	BA000007	ecop.seq	ecop.mne
45	Caulobacter crescentus	4	4,038,387	Mar 23, 2001	AE005673	ccre.seq	ccre.mne
46	Streptococcus pyogenes strain SF370 serotype M1	1,8	1,852,442	Apr 17, 2001	AE004092	spyo.seq	spyo.mne
47	Staphylococcus aureus (strain:N315)	2,8	2,838,744	Apr 23, 2001	BA000018	saun.seq	saun.mne
48	Staphylococcus aureus (strain:Mu50)	2,8	2,878,484	Apr 30, 2001	BA000017	sauo.seq	sauo.mne
49	Sulfolobus solfataricus	3.0	3,008,365	Apr 30, 2001	AE006641	ssol.seq	ssol.mne
50	Mycobacterium tuberculosis CDC1551	4,4	4,420,576	May 2, 2001	AE000516	mtuc.seq	mtuc.mne
51	Mycoplasma pulmonis (strain UAB CTIP)	0.93	963,979	May 17, 2001	AL445566	mpul.seq	mpul.mne
52	Sinorhizobium meliloti plasmid pSymA	1.3	1,361,426	Jul 14, 2001	AE007195	smel.seq	smel.mne
53	Clostridium acetobutylicum ATCC824	4.5	4,155,410	Jul 30, 2001	AE001437	cace.seq	cace.mne
54	Sinorhizobium meliloti chromosome	3.6	3,654,685	Aug 3, 2001	AL591688	smec.seq	smec.mne
55	Agrobacterium tumefaciens strain C58 circular chromosome	2.8	2,856,721	Aug 21, 2001	AE007869	atum.seq	atum.mne
56	Streptococcus pneumoniae TIGR4	2.2	2,172,327	Sep 2, 2001	AE005672	spne.seq	spne.mne
57	Streptococcus pneumoniae R6	2.0	2,049,595	Sep 9, 2001	AE007317	spnf.seq	spnf.mne
58	Sulfolobus tokodaii	2.6	2,695,206	Sep 19, 2001	BA000023	stok.seq	stok.mne
59	Rickettsia conorii Malish 7	1.3	1,275,535	Sep 19, 2001	AE006914	rcon.seq	rcon.mne
60	Agrobacterium tumefaciens strain C58 linear chromosome	2.0	2,085,892	Sep 21, 2001	AE007870	atul.seq	atul.mne
61	Yersinia pestis strain CO92	4.6	4,654,678	Oct 6, 2001	AL590842	ypes.seq	ypes.mne
62	Listeria innocua Clip11262	3.0	3,011,758	Oct 27, 2001	AL592022	linn.seq	linn.mne
63	Listeria monocytogenes strain EGD	2.9	2,945,078	Oct 27, 2001	AL591824	lmon.seq	lmon.mne
64	Salmonella typhimurium LT2	4.8	4,870,812	Oct 28, 2001	AE006468	sthy.seq	sthy.mne
65	Salmonella enterica serovar Typhi	4.8	4,809,987	Oct 28, 2001	AL513382	sthi.seq	sthi.mne
66	Nostoc sp PCC 7120	6.4	6,414,671	Nov 30, 2001	BA000020	nost.seq	nost.mne
67	Brucella melitensis strain 16M chromosomes I and II	3.3	3,312,931	Dec 29, 2001	AE008917 AE008918	bmel.seq	bmel.mne
68	Clostridium perfringens	3.0	3,031,880	Jan 16, 2002	BA000016	cper.seq	cper.mne
69	Pyrobaculum aerophilum strain IM2	2.2	2,234,390	Jan 18, 2002	AE009441	pyra.seq	pyra.mne
70	Ralstonia solanacearum GMI1000	5.8	5,812,322	Feb 01, 2002	AL646052 AL646053	rsol.seq	rsol.mne
71	Pyrococcus furiosus DSM 3638	1.9	1,918,246	Feb 27, 2002	AE009950	pfur.seq	pfur.mne
72	Wigglesworthia brevipalpis	0.7	697,721	Mar 4, 2002	BA000021	wbre.seq	wbre.mne
73	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	2.1	2,186,280	Mar 27, 2002	AE009951	fnum.seq	fnum.mne
74	Streptococcus pyogenes strain MGAS8232	1,9	1,905,297	Mar 29, 2002	AE009949	spyg.seq	spyg.mne
75	Methanopyrus kandleri AV19	1.7	1,703,889	Apr 4, 2002	AE009439	mkan.seq	mkan.mne
76	Methanosarcina acetivorans str. C2A	5.7	5,783,472	Apr 5, 2002	AE010299	mace.seq	mace.mne
77	Thermoanaerobacter tengcongensis strain MB4T	2.7	2,703,405	May 9, 2002	AE008691	tten.seq	tten.mne
78	Streptomyces coelicolor	8.0	8,707,150	May 9, 2002	AL645882	scoe.seq	scoe.mne
79	Methanosarcina mazei strain Goe1	4.1	4,119,025	May 21, 2002	AE008384	mmaz.seq	mmaz.mne
80	Xanthomonas campestris pv. str. ATCC 33913	5.1	5,103,728	May 29, 2002	AE008922	xcam.seq	xcam.mne
81	Xanthomonas axonopodis pv. citri str. 306	5.2	5,203,494	May 29, 2002	AE008923	xaxo.seq	xaxo.mne
82	Staphylococcus aureus (strain:MW2)	2,8	2,841,566	May 30, 2002	BA000033	sauw.seq	sauw.mne
83	Corynebacterium glutamicum ATCC 13032	3.3	3,309,851	June 6, 2002	BA000036	cglu.seq	cglu.mne
84	Buchnera aphidicola str.	0.6	644,814	July 3, 2002	AE013218	baph.seq	baph.mne
85	Chlorobium tepidum TLS	2.1	2,166,446	July 4, 2002	AE006470	ctet.seq	ctet.mne
86	Streptococcus pyogenes strain MGAS315	1,9	1,902,681	Jul 20, 2002	AE014074	spyq.seq	spyq.mne
87	Yersinia pestis strain KIM	4.6	4,625,545	Jul 29, 2002	AE009952	ypet.seq	ypet.mne
88	Thermosynechococcus elongatus BP-1	2.5	2,594,257	Aug 31, 2002	BA000039	telo.seq	telo.mne
89	Oceanobacillus iheyensis	3,5	3,631,128	Sep 14, 2002	BA000028	oihe.seq	oihe.mne
90	Streptococcus agalactiae NEM316	1,3	1,313,350	Sep 19, 2002	AL732656	saga.seq	saga.mne
91	Streptococcus agalactiae serotype V	2,1	2,166,207	Sep 19, 2002	AE009948	sagv.seq	sagv.mne
92	Bifidobacterium longum NCC2705	2.2	2,268,766	Sep 27, 2002	AE014295	blon.seq	blon.mne
93	Brucella suis 1330 chr II	1.2	1,213,801	Oct 4, 2002	AE014292	bsui.seq	bsui.mne
94	Corynebacterium efficiens YS-314	3.1	3,147,590	Oct 5, 2002	BA000035	ceff.seq	ceff.mne
95	Shigella flexneri 2a str. 301	4.6	4,631,693	Oct 18, 2002	AE005674	sfle.seq	sfle.mne
96	Streptococcus mutans UA159	2.0	2,031,491	Oct 28, 2002	AE014133	smut.seq	smut.mne
97	Shewanella oneidensis MR-1	5.0	4,996,813	Dec 05, 2002	AE014299	sone.seq	sone.mne
98	Pseudomonas putida KT2440	6.1	6,183,063	Dec 16, 2002	AE015451	pput.seq	pput.mne
99	Mycoplasma penetrans	1.4	1,358,833	Dec 16, 2002	BA000026	mpen.seq	mpen.mne
100	Vibrio vulnificus CMCP6	5.2	5,127,698	Dec 26, 2002	AE016795 AE016796	vvul.seq	vvul.mne
101	Bradyrhizobium japonicum	9.1	9,107,328	Dec 26, 2002	BA000040	bjap.seq	bjap.mne
102	Escherichia coli CFT073	5.2	5,232,448	Dec 26, 2002	AE014075	ecoq.seq	ecoq.mne
103	Staphylococcus epidermidis ATCC 12228	2.5	2,499,759	Jan 3, 2003	AE015929	sepi.seq	sepi.mne
104	Clostridium tetani E88	2.8	2,799,791	Feb 8, 2003	AE015927	cttn.seq	cttn.mne
105	Lactobacillus plantarum strain WCFS1	3.3	3,308,774	Feb 9, 2003	AL935263	lpla.seq	lpla.mne
106	Xylella fastidiosa Temecula1	2.5	2,520,282	Feb 9, 2003	AE015929	xfat.seq	xfat.mne
107	Tropheryma whipplei TW08/27	0.9	926,038	Feb 19, 2003	BX072543	twhi.seq	twhi.mne
108	Vibrio parahaemolyticus	5.1	5,166,520	Mar 7,2003	BA000031 BA000032	vpar.seq	vpar.mne
109	Coxiella burnetii strain RSA 493	1.9	1,995,635	Apr 6,2003	AE016828	cbur.seq	cbur.mne
110	Streptomyces avermitilis	9.0	9,027,058	Apr 9,2003	BA000030	save.seq	save.mne
111	Chlamydophila caviae GPIC	1.1	1,173,570	Apr 16, 2003	AE015925	ccav.seq	ccav.mne
112	Bacillus subtilis	5.4	5,412,829	Apr 17, 2003	AE016877	bcer.seq	bcer.mne
113	Leptospira interrogans serovar lai str. 56601	4.3	4,355,921	Apr 30, 2003	AE010300	lint.seq	lint.mne
114	Nitrosomonas europaea ATCC 19718	2.8	2,812,544	May 5, 2003	AL954747	neur.seq	neur.mne
115	Bacillus anthracis str. Ames	5.2	5,228,313	May 5, 2003	AE016879	bant.seq	bant.mne
116	Mycoplasma gallisepticum strain R	0.9	996,602	June, 11, 2003	AE015450	mgal.seq	mgal.mne
117	Mycobacterium bovis AF2122/97	4.3	4,346,142	June, 13, 2003	BX248333	mbov.seq	mbov.mne
118	Helicobacter hepaticus ATCC 51449	1.8	1,799,446	Jun 28, 2003	AE017125	hhep.seq	hhep.mne
119	Pirellula sp. strain 1	7.1	7,146,726	Jun 30, 2003	BX119912	pisp.seq	pisp.mne
120	Haemophilus ducreyi 35000HP	1.6	1,699,255	Aug 4, 2003	AE017143	hduc.seq	hduc.mne
121	Chlamydophila pneumoniae TW-183	i1.2	1,226,115	Aug 4, 2003	AE009440	cpnt.seq	cpnt.mne
122	Prochlorococcus marinus subsp. marinus str. CCMP1375	1.7	1,751,380	Aug 4, 2003	AE017126	pmas.seq	pmas.mne
123	Prochlorococcus marinus MED4	1.6	1,658,190	Aug 19, 2003	BX548174	pmar.seq	pmar.mne
124	Prochlorococcus marinus MIT9313	2.4	2,411,173	Aug 19, 2003	BX548175	pmat.seq	pmat.mne
125	Tropheryma whipplei str. Twist	0.9	927,423	Aug 19, 2003	AE014184	twht.seq	twht.mne
126	Synechococcus sp. WH8102	2.4	2,434,728	Aug 19, 2003	BX548020	syns.seq	syns.mne
128	Bordetella pertussis strain Tohama I	4.1	4,086,739	Aug 19, 2003	BX640420	bper.seq	bper.mne
129	Bordetella bronchiseptica strain RB50	5.3	5,339,929	Aug 19, 2003	BX470250	bbro.seq	bbro.mne
130	Bordetella parapertussis strain 12822	4.8	4,774,201	Aug 19, 2003	BX470249	bpar.seq	bpar.mne
131	Chromobacterium violaceum ATCC 12472	4.7	4,751,980	Aug 31, 2003	AE016825	cvio.seq	cvio.mne
132	Porphyromonas gingivalis W83	2.3	2,343,896	Sep 4, 2003	AE015924	pgiv.seq	pgiv.mne
133	Pseudomonas syringae pv. tomato str. DC3000	6.4	6,398,326	Sep 5, 2003	AE016853	psyn.seq	psyn.mne
134	Wolinella succinogenes	2.1	2,110,655	Sep 8, 2003	BX571656	wsuc.seq	wsuc.mne
135	Gloeobacter violaceus PCC 7421	4.6	4,659,769	Sep 28, 2003	BA000045	gvio.seq	gvio.mne
136	Photorhabdus luminescens subsp. laumondii TTO1	5.6	5,689,787	Sep 30, 2003	BX470251	plum.seq	plum.mne
137	Geobacter sulfurreducens PCA	4.4	4,426,126	Dec 30, 2003	AE017180	gsul.seq	gsul.mne
138	Nanoarchaeum equitans Kin4-M	0.5	490,885	Dec 30, 2003	AE017199	nequ.seq	nequ.mne
139	Bdellovibrio bacteriovorus	3.7	3,783,450	Feb 5, 2004	BX842601	bbac.seq	bbac.mne
140	Lactobacillus johnsonii NCC 533	1.9	1,993,036	Feb 5, 2004	AE017198	ljoh.seq	ljoh.mne
141	Mycobacterium avium subsp. paratuberculosis str. k10	4.8	4,830,681	Feb 5, 2004	AE016958	mavi.seq	mavi.mne
142	Treponema denticola ATCC 35405	2.8	2,843,741	Feb, 9, 2004	AE017226	tden.seq	tden.mne
143	Wolbachia endosymbiont	1.2	1,268,022	Feb, 13, 2004	AE01722 6	wend.seq	wend.mne
144	Mycoplasma mycoides subsp. mycoides SC	0.3	347,558	Feb, 13, 2004	BX293980	mmyc.seq	mmyc.mne
145	Thermus thermophilus HB27	1.8	1,895,237	Apr 6, 2004	AE017221	tthe.seq	tthe.mne

(*) The FASTA sequences are the collection of entries in GenBank for the genome of the corresponding species. It may be some overlap in the differents entries. For an access to the entire sequence (in one entry) see : ftp://ftp.ebi.ac.uk/pub/databases/genomes/Bacteria/ or ftp://ftp.ncbi.nih.gov/genomes/Bacteria/

Data on Microbial Genomes at INFOBIOGEN

Incomplete genomes
Genomes in FASTA format
Other links for microorganism genomes
DEAMBULUM (Prokaryota genomes)
BLAST2 on incomplete genomes is also possible (as a tool) using SRS6
EMGLib SRS Coding sequences of completed genomes
EMGPep SRS Protein sequences of completed genomes

Others links

EMGLib Enhanced Microbial Genomes Library - PBIL Lyon
MICADO INRA - Jouy en Josas
COLIPAGE Institut de Génétique - Orsay
Completed Genomes at the EBI
Directory /genomes/Bacteria - EBI FTP
Genome Centers and Databases - NCBI
Complete Genomes - NCBI
Microbial genomes - NCBI all formats
Directory /genomes/Bacteria on NCBI FTP
GOLD : Genomes OnLine Database (Nikos Kirpides)
Complete genome papers
Genome sequencing projects (Terry Gaasterland)
TIGR Microbial Database
MUMmer: The Whole Genome Alignment Tool - TIGR
The Comprehensive Microbial Resource Home Page - TIGR
Sequenced Genomes - Genome News Network
Completely Sequenced Genomes - Rockefeller
SACSO: Systematic Analysis of Completely Sequenced Organisms
DNA Structural Analysis of Complete Genomes and Chromosomes CBS - Denmark
Microbial Genome Database for Comparative Analysis - Japan
PEDANT - Genome analysis and annotation at MIPS
HAMAP High quality Automated Microbial Annotation of Proteomes HAMAP Links
WIT2 View Models : 53 genomes
Complete proteomes - Expasy
Bacterial Up-to-date nomenclature
Taxonomy - NCBI
Life on Earth

Comments and suggestions to: [dessen@infobiogen.fr]