Infobiogen
INCOMPLETE MICROBIAL GENOMES


BLAST2 on incomplete genomes at INFOBIOGEN
(Select BLASTN or TBLASTN and "Genomes incomplets")

FASTA on incomplete genomes at INFOBIOGEN

(Select FASTA or TFASTA or TFASTX and "Genomes incomplets")

Updated Aug 19, 2003

A Reference Site
B Sequences yet in GenBank (SRS)

A B Genome
Taxonomy NCBI
Size
(Mb)
Source Contigs Base
pairs
Update Sequences
(FASTA)
Actinobacillus actinomycetemcomitans 2.2 OU-ACGT 128 2,048,834 Nov 3, 2000 aact
Bacillus cereus Integrated Genomics 1528 5,458,268 Dec 29, 2001 bcer
Bacillus stearothermophilus 10 OU-ACGT 318 3,434,240 Nov 23, 2001 bste
Bacillus thuringiensis insecticidal toxin plasmid 0.137 SANGER 1 137,000 Nov 23, 2001 bthu
Bacteroides fragilis NCTC9343 5.3 SANGER 44 5,225,109 Nov 23, 2001 bfra
Burkholderia cepacia 7.6 SANGER 1767 7,901,631 Nov 23, 2001 bcep
Burkholderia fungorum LB40 8 JGI 462 9,638,173 Sep 29,2001 bfun
Burkholderia pseudomallei K96243 6.0 SANGER 56 7,254,622 Nov 23,2001 bpse
Chlorobium tepidum 2.1 TIGR 499 1,937,631 Sep, 3, 1998 ctep
Chloroflexus aurantiacus J-10-f1 3.0 JGI 1142 4,933,722 Sep 29,2001 caur
Clostridium botulinum 4 SANGER 54 1,443,362 Nov 23,2001 cbot
Clostridium difficile 630 4.4 SANGER 212 4,604,006 Nov 23,2001 cdif
Corynebacterium diphtheriae NCTC13129 3.1 SANGER 21 2,488,635 Nov 23, 2001 cdip
Cytophaga hutchinsonii ATCC33406 4.0 JGI 166 4,428,762 Sep 29,2001 chut
Cowdria ruminantium 1.576 SANGER 6155 3,139,612 Nov 23, 2001 crum
Desulfitobacterium hafniense DCB-2 4.6 JGI 3299 6,062,662 Sep 29,2001 desu
Enterococcus faecium 2.8 JGI 1265 3,736,478 Sep 29,2001 efac
Enterococcus faecalis 3.0 TIGR 293 3,209,119 Jun 18, 1998 efae
Ferroplasma acidarmanus 2.0 JGI 157 1,933,093 Sep 29,2001 faci
Francisella tularensis 2.0 MEDMICRO 10,504 8,952,711 July 19, 1999 ftul
Fusobacterium nucleatum - BAYLOR 96 2,028,914 Nov 30, 2001 fnuc
Klebsiella pneumoniae strain MGH78578 5.54 WASHU 920 5,567,788 Aug 20, 2000 kpne
Mannheimia haemolytica - BAYLOR 211 2,498,406 Nov 30, 2001 mhae
Magnetococcus MC-1 4.5 JGI 480 4,637,882 Sep 29,2001 mmc1
Magnetosprillium magnetotactium MS-1 4.5 JGI 3880 8,550,926 Sep 29,2001 mmag
Marine Synechococcus 2.8 JGI 268 2,745,587 29 Sep, 2001 msyn
Methanosarcina barkeri 2.8 - 5.0 JGI 1965 4,830,093 29 Sep, 2001 mbar
Methylobacterium extorquens 3.64 WASHINGTON 2331 - Aug 20, 2000 mext
Mycobacterium tuberculosis CSU#93 4.4 TIGR 42 4,306,088 Oct 5,1998 mtub
Neisseria gonorrhoeae 2.2 OU-ACGT 22 2,153,944 Nov 23, 2001 ngon
Neisseria meningitidis serogroup C strain FAM18 2.2 SANGER 43 2,236,675 Nov 23, 2001 nmsc
Nostoc punctiforme - JGI 509 9,220,054 Sep 29,2001 npun
Porphyromonas gingivalis W83 2.2 TIGR 218 2,447,622 Jul 29, 1998 pgin
Pyrococcus furiosus 2.1 Utah GC 1 1,908,000 May 11, 1999 pfur
Pseudomonas fluorescens Pf0-1 5.5 JGI 316 6,528,041 Sep 29, 2001 pflu
Ralstonia eutropha CH34 5.0 JGI 712 6,735,877 Sep 29,2001 rals
Rhodobacter capsulatus 3.2 CHICAGO 8 1,377,526 Sep 22, 1998 rcap
Rhodobacter capsulatus SB1003 3.2 Integrated Genomics 9 3,721,293 Dec 29, 2001 rcas
Rhodobacter spheroides 2.4.1 3.2 JGI 195 4,619,513 Nov 23, 2001 rsph
Rhodopseudomonas palustris CGA009 5.46 JGI 59 5,497,712 Sep 29,2001 rpal
Rickettsia typhi - BAYLOR 811 3,159,456 Nov 30, 2001 rtyp
Salmonella paratyphi A - Washington U 910 4,377,152 Nov 30,2001 spar
Salmonella typhimurium strain TR7095 4.5 Washington U 740 298,046 May 14, 1997 sthyw
Sphingomonas aromaticivorans 2.8 JGI 216 4,236,396 Sep 29,2001 saro
Spiroplasma kunkelii Strain CR2-3x - OU-ACGT 54 1,443,362 Nov 23, 2001 skun
Staphylococcus aureus NCTC 8325 2.8 OU-ACGT 96 2,860,884 Aug 5, 2000 saur
Staphylococcus aureus COL 2.8 TIGR 2449 2,679,701 Oct 5, 1998 saut
Staphylococcus aureus EMRSA-16 2.8 SANGER 25 2,902,619 Nov 23, 2001 sauu
Staphylococcus aureus MSSA-476 2.8 SANGER 47 2,804,513 Nov 23, 2001 sauv
Streptococcus equi 2.3 SANGER 219 2,188,141 Nov 23, 2001 sequ
Streptococcus gordonii ? TIGR 4596 4,351,196 Dec 15, 1998 sgor
Streptococcus pyogenes M5 2.3 SANGER 30 1,858,153 Nov 23, 2001 spyp
Shewanella putrefaciens 4.5 TIGR 2430 5,974,789 Oct 5, 1998 sput
Streptomyces coelicolor 8.0 SANGER 324 8,679,004 Nov 23,2001 scoe
Treponema denticola - BAYLOR 193 3,024,065 Nov 30, 2001 tden
Thermobifida fusca YX 5.46 JGI 64 3,656,222 Sep 29, 2001 ther
Xylella fastidiosa almond Dixon 2.6 JGI 314 2,506,844 Sep 29, 2001 xalm
Xylellao fastidiosa oleander Ann1 2.6 JGI 154 2,914,294 Sep 29,2001 xole
Yersinia enterocolitica 4.4 SANGER 20 4,661,129 Nov 23,2001 yent



Contributing Genome Centers


Data on Microbial Genomes at INFOBIOGEN

Others links
Comments and suggestions to: [dessen@infobiogen.fr]